Ribeiro F. A. L., Sabino L. C., Ferreira M.M.C., “QSPR Models to Predict the Organic Carbon-Water Partition Coefficient (Koc) and Bioconcentration Factor (BCF) for Polycyclic Aromatic Hydrocarbons (PAHs)”.Caxambu, MG, Brazil, 11-16/11/2001: 1º Simpósio Brasileiro em Química Medicinal, QSAR e Modelagem Molecular: Novas Estratégias em Planejamento Racional de Fármacos [1st Brazilian Symposium on Medicinal Chemistry, QSAR and Molecular Modeling: New Approaches in Drug Design]. Poster APM17. Section: 4. Applications of Multivariate QSAR.
Chemometrics
Name
Ribeiro, F. A. L.; Sabino, L. C. ; Ferreira, M. M. C
Institution/Company
Universidade Estadual de Campinas
Country
Brasil
First Abstract Title
QSPR Models to Predict the Organic Carbon-Water Partition Coefficient (Koc)
and Biococentration Factor (BCF) for
Polycyclic Aromatic Hydrocarbons (PAH)
First Abstract
The polycyclic aromatic hydrocarbons (PAHs) have been, for a long time,
a focus of great attention by the scientific
community due to their impact on public health and the environment. Some
of these compounds such as
benz[a]anthracene, chrysene, dibenz[a,h]anthracene are known for their
toxicity and carcinogenic actions. They are
usually introduced in the environment as a result of anthropogenic activities
which have increased dramatically in the
last 20 years. It is well established that the fate of PAHs in the environment
is primarily controlled by their
physicochemical properties. These compounds are quite involatile, highly
hydrophobic and resistant to chemical
reaction and as a result, they show tendency to accumulate in biota, soils
sediments and are also highly dispersed by
the atmosphere. Consequently, meaningful health and environmental assessment
requires reliable experimental data.
Unfortunately, very often these information cannot be found in the literature,
mainly due to experimental difficulties. In
order to solve these deficiencies, the use of QSPR models have become popular
in the scientific community. These
models use molecular descriptors in an attempt to predict the physicochemical
and biological activities for those
chemicals with no experimental value. Two of these properties are subject
of this work: 1- the organic carbon-water
partition coefficient (Log Koc) which is the most used parameter to indicate
soil mobility in water-soil systems
(compounds with higher values of of Log Koc tend to be less mobile), and
2- the bioconcentration factor (BCF) which
describes bioconcentration in terms of the ratio of the concentration of
a chemical present in an aquatic organism to
the concentration in the surrounding environment. A set of 70 PAHs were
studied, and QSPR models constructed for
the properties mentioned above. The experimental data was taken from literature
(1). The models were constructed by
partial least square methods (PLS) in autoscaled data and leave-one-out
cross validation was the method used for
validation. The molecular descriptors were calculated by semi-empirical
method AM1 implemented in Spartan and
WHIM-3D software. The molecular descriptors which best correlated with
Log Koc were molecular volume, molecular
weight, Randic conectivity index and Wiener Index (2, 3, 4). For BCF they
were molecular area, molecular volume,
molecular weight, Randic conectivity index and Wiener Index. The results
for PLS model are shown Table 1.
Table 1. PLS results for Log, Koc and BCF properties:
--------------------------------------------------------------------
Property LatentVariable SEV % Variance
R2
Log Koc 2
0.1400 99.9612 0.9220
Log BCF 2
0.2000 99.7131 0.9202
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The crossvalidated residuals (experimental - estimated values) for Log
Koc model are below 4 %, and for Log BCF model
are below 10 %. The models obtained were used to predict these properties
for those compounds in which the experimental
measurements were not performed yet. Ten molecules were used to model the
Log Koc, and the soil sorption was predicted
for the other 60 molecules. Log BCF was modeled using a set of 13 molecules
and the bioconcentration factor values for o
other 57 molecules were predicted.
Acknowledgments. This work was supported by FAPESP, CAPES and FAEP. We
thank Dr. Lucicleide R. Cirino and
Thaís F. Parreira, for assistance with the theoretical calculations
and valuable suggestions. Also CENAPAD, for
computational support.
References.
1-Mackay et alli, Illustrated Handbook of Physical-Chemical Properties
and Environmental Fate for Organic
Chemicals, Lewis, 1998.
2- Randic, J. Am. Chem. Soc., 1975, 97, 6609.
3- Wiener, J. Am. Chem. Soc., 1947, 69, 17. et alli, Chemosphere, 1996,
33, 71.
4-Todeschini & Gramatica, Quanti Struc-Act. Relat., 1997, 16, 113.