101.
Ferreira M. M. C., Pereira M. C. S., Kiralj R., "COMPUTATIONAL STUDY
OF ARTEMISININ INTERACTION WITH HEME AND ITS POSTERIOR DECOMPOSITION".
Moscow, Russia, 01-05/09/2007: Fourth International Symposium on Computational
Methods in Toxicology and Pharmacology Integrating Internet Resources,
Book of Abstracts (2007) 95. Poster PO-25.
Here below ais a simplified version of the conference home page which can be found at: http://www.ivtn.ru/cmtpi-2007/index.php
# Federal Agency of Science
and Innovation
# Russian Academy of
Sciences (RAS)
# Russian Academy of
Medical Sciences (RAMS)
# Russian Section of
the QSAR and Modelling Society
# Institute of Biomedical
Chemistry of RAMS
# Institute of Physiologically
Active Compounds of RAS
# NC Group/NVK “VIST”
# Reisebuero WELT
International Scientific Advisory Board and Organizing Committees cordially invite you to take part in the Fourth International Symposium on Computational Methods in Toxicology and Pharmacology Integrating Internet Resources [CMTPI-2007]. The meeting will be held in Moscow, Russia from September 1th to 5th 2007.
Co-Chairmen
Nikolai Zefirov, Full Member
of Russian Academy of Sciences
Alexander Archakov, Full
Member of Russian Academy of Medical Sciences
Local Organizing Committee
Chairman
Vladimir Poroikov (Institute
of Biomedical Chemistry of RAMS, Russia)
Co-Chairman
Oleg Mikheev (NC Group/NVK
“VIST”)
Secretary
Paulina Gabusu (NC Group/NVK
“VIST”)
Members
E. Beyer (Institute of Biomedical
Chemistry of RAMS, Russia)
T. Fedoronchuk (Institute
of Biomedical Chemistry of RAMS, Russia)
A. Kabankin (Center of Theoretical
Problems of Physical-Chemical Pharmacology of RAS, Russia)
A. Lagunin (Institute of
Biomedical Chemistry of RAMS, Russia )
A. Lisitsa (Institute of
Biomedical Chemistry of RAMS, Russia )
S. Novikov (Institute of
Human Ecology and Hygiene of Environment of RAMS, Russia)
N. Pshenichnikova (NC Group/NVK
“VIST”)
V. Palyulin (Moscow State
University , Russia)
E. Shilova (National Research
Center for Biologically Active Compounds, Russia)
International Organizing Committee
A. Carpy (University of Bordeaux
I, France)
J. Devillers (CTIS, France)
Bo Tao Fan
A. Geronikaki (Aristotelian
University of Thessaloniki , Greece)
International Scientific Advisory Board
S. Basak (University of Minnesota
, USA)
H. Chuman (University of
Tokushima , Japan)
A. Kel (Biologische Datenbanken
GmbH, Germany)
D. Livingstone (Chemquest
, UK)
K.T. No (BMDRC, Yonsei University
, Korea)
M. Nicklaus (National Cancer
Institute, NIH , USA)
O. Raevsky (Institute of
Physiologically Active Compounds of RAS, Russia)
A. Richard (Environmental
Protection Agency , USA)
A. Saxena (Central Drug
Research Institute, India)
A. Tropsha (University of
North Carolina in Chapel Hill, USA)
A. Worth (EC Joint Research
Center , Italy)
J. Yao (Shanghai Institute
of Organic Chemistry , China)
Following the traditions of CMPTI-2001 (Bordeaux , France), CMTPI-2003 (Thessaloniki , Greece) and CMTPI-2005 (Shanghai , China), CMTPI-2007 will provide an International forum for presentation and discussion, by both highly skilled professionals and young scientists, of recent progress and future trends in all aspects of Computational Methods in Toxicology and Pharmacology including the Internet resources. The Symposium will feature plenary lectures, oral talks and posters broadly covering the following fields:
* (Q)SAR,
QSPR and Molecular Modelling in Drug Discovery
* (Q)SAR
and QSPR Modelling in Environmental Chemistry
* “OMIC”-sciences
and bioinformatics applications in pharmacology and toxicology
* Commercial
and non-commercial computational tools and databases in the Internet for
computational pharmacology and toxicology
Program
01.09.2007
12:00 - 18:00 Registration
18:00 - 18:40 Opening
Ceremony
18:40 - 19:00 To
the memory of Prof. Bo Tao Fan
19:00 - 19:45 Plenary
lecture
Ann
Richard. National Center for Computational Toxicology, NC,
USA. NEW PUBLIC DATA & INTERNET RESOURCES IMPACTING PREDICTIVE
TOXICOLOGY
20:00 - 22:00 Welcome
Party
02.09.2007
Internet Tools & Databases
(I)
Chairs:
Alexander Kel and Alexander Tropsha
09:00 - 09:40 Plenary
Lecture
Marc
Nicklaus. National Cancer Institute, National Institute of
Health, DHHS. NCI-Frederick , USA. INTERNET RESOURCES INTEGRATING MANY
SMALL-MOLECULE DATABASES
09:40 - 10:00
Major Talk
Wolf-Dietrich
Ihlenfeldt. Xemistry GmbH, Germany. A VIRTUAL FILE SYSTEM
FOR THE PUBCHEM CHEMICAL STRUCTURE AND BIOASSAY DATABASE
10:00 - 10:20 Major
Talk
Andrey
Lisitsa. Institute of Biomedical Chemistry of Rus. Acad.
Med. Sci., Moscow, Russia. CYTOCHROME P450 KNOWLEDGEBASE FOR DRUG DISCOVERY
10:20 - 10:40 Major
Talk
Alexander
Kos. AKos GmbH, Steinen, Germany. WORKFLOW ENVIRONMENT
FOR ESTIMATING BIOLOGICAL EFFECTS
10:40 - 11:10 Coffee
Break
Internet Tools & Databases
(II)
Chairs:
Roman Efremov and Marc Nicklaus
11:10 - 11:30 Major
Talk
Anil
Saxena. Central Drug Research Institute (CDRI), Lucknow,
India. INTERNET RESOURCES IN GPCR MODELLING
11:30 - 11:50 Major
Talk
Athina
Geronikaki. Aristotle University of Thessaloniki, Thessaloniki,
Greece. PREDICTION OF BIOLOGICAL ACTIVITY VIA INTERNET. MEDICINAL CHEMIST'S
POINT OF VIEW
11:50 - 12:05 Oral
Communication
Greg
Pearl. ACD/Labs, Toronto, Ontario, Canada. EFFECT OF
DESCRIPTOR SELECTION: COMPARING LOGD TO LOGP IN DRUG-LIKENESS PROFILING
12:05 - 12:20 Oral
Communication
Alexey
Lagunin. Institute of Biomedical Chemistry of Rus. Acad.
Med. Sci., Moscow, Russia. PHARMAEXPERT: ESTIMATING DRUG-DRUG INTERACTIONS
AND FINDING COMPOUNDS WITH MULTIPLE MECHANISMS OF ACTION
12:20 - 12:35 Oral
Communication
Russel
Naven. Lhasa Limited, Leeds, UK. IMPROVING THE PREDICTIVE
PERFORMANCE OF AROMATIC AMINE MUTAGENICITY IN DEREK FOR WINDOWS THROUGH
THE ANALYSIS OF PROPRIETARY DATA
12:35 - 14:30 Lunch
15:00 - 19:00 Sightseeing
Tour
03.09.2007
"OMIC"-Sciences and Bioinformatics
(I)
Chairs:
Johann Gasteiger and Andrey Lisitsa
09:00 - 09:40 Plenary
Lecture
Alexander
Kel. BIOBASE GmbH, Wolfenbuttel, Germany. EXPLAIN™: FINDING
MOLECULAR MECHANISM OF DISEASE FROM PROMOTER MODELS TO SIGNALING PATHWAYS
09:40 - 10:00 Major
Talk
Ivan
Rusyn. Department of Environmental Sciences and Engineering;
University of North Carolina at Chapel Hill, USA. BRIDGING INVESTIGATIVE
TOXICOLOGY AND DISEASE-ORIENTED RESEARCH BY BUILDING A MOUSE-TO-HUMAN PARADIGM
10:00 - 10:20 Major
Talk
Razif
Gabdoulline. EML Research GmbH, Molecular and Cellular Modeling
Group, Heidelberg, Germany. ENZYME KINETIC PARAMETER ESTIMATION IN
SYSTEMS BIOLOGY USING PROTEIN STRUCTURES
10:20 - 10:35 Oral
Communication
Hanjun
Zou. Intertek Consumer Goods North & East China, Shanghai,
China. MOLECULAR INSIGHT INTO THE INTERACTION BETWEEN IFABP AND PA
BY USING MM-PBSA AND ALANINE SCANNING METHODS
10:35 - 10:50 Oral
Communication
Sergey
Moshkovskii. Institute of Biomedical Chemistry of Rus. Acad.
Med. Sci., Moscow, Russia. ANALYSIS OF PEAK INTENSITY CORRELATIONS
TO MAXIMIZE BIOLOGICAL MEANING OF PROTEOME DIAGNOSTIC MASS-SPECTRA
10:50 - 11:20 Coffee
Break
"OMIC"-Sciences and Bioinformatics
(II)
Chairs:
Izet Kapetanovic and Greg Pearl
11:20 - 12:00 Plenary
Lecture
Johann
Gasteiger. Computer-Chemie-Centrum and Institute of Organic
Chemistry, University of Erlangen-Nuremberg, Molecular Networks GmbH, Erlangen,
Germany. EXPLORATION INTO BIOCHEMICAL PATHWAYS
11:55 - 12:15 Major
Talk
Milan
Randic. National Institute of Chemistry, Ljubljana, Slovenia.
ON GRAPHICAL REPRESENTATION OF PROTEINS AND PROTEIN ALIGNMENT
12:15 - 12:30 Oral
Communication
Adel
Golovin. EMBL-EBI, Hinxton Hall, Genome Campus, Cambridge,
UK. A DATABASE SEARCH AND RETRIEVAL SYSTEM FOR THE ANALYSIS AND VIEWING
OF BOUND LIGANDS, ACTIVE SITES, SEQUENCE MOTIFS AND 3D STRUCTURAL MOTIFS
12:30 - 12:45 Oral
Communication
Carlos
da Silva. School of Pharmaceutical Sciences of Ribeirao Preto,
University of Sao Paulo, Ribeirao Preto - SP, Brazil. HOMOLOGY MODELING
AND COMPUTER-AIDED DESIGN OF HNRNP K MARKER AND LIGANDS IN HEAD AND NECK
CANCER
12:45 - 14:00 Lunch
QSAR and Environmental
Toxicity (I)
Chairs:
James Devillers and Ann Richard
14:00 - 14:40 Plenary
Lecture
Kyoung
Tai No. Bioinformatics and Molecular Design Research Center,
Seoul, Korea. PREDICTION OF ENVIRONMENTAL TOXICITIES
14:40 - 15:00 Major
Talk
Jacques
Chretien. BioChemics Consulting SAS, Orleans, France.
NEW IN SILICO STRATEGIES FOR A SSESSING ENVIRONMENTAL CHEMISTRY AND REACH
CHALLENGES
15:00 - 15:20 Major
Talk
Daniel
Zuaboni. MerckSerono Geneva Research Center, University of
Lausanne, Geneva, Switzerland. CONSENSUS MODELS AND META-MODELS FOR
THE PREDICTION OF LOGP USING NEURAL NETWORKS
15:20 - 15:35 Oral
Communication
Yuriy
Abramov. Pfizer Global Research and Development, Groton,
USA. REACTIVE METABOLISM – QSAR AND QUANTUM CHEMISTRY MODELING
15:35 - 15:50 Oral
Communication Mariana Novic. National Institute of Chemistry, Ljubljana,
Slovenia. MODELLING, OPTIMIZATION, AND VARIABLES SELECTION IN QSA(P)R STUDIES.
THE ROLE OF COUNTER-PROPAGATION NEURAL NETWORK
15:50 - 16:20 Coffee
Break
16:20 - 18:20 Poster
Session
04.09.2007
QSAR and Environmental
Toxicity (II)
Chairs:
Jacques Chretien and Kyoung Tai No
09:00 - 09:40 Plenary
Lecture
James
Devillers. CTIS, Rillieux La Pape, France. STRUCTURE-ACTIVITY
MODELING OF A DIVERSE SET OF ANDROGEN RECEPTOR LIGANDS
09:40 - 10:00 Major
Talk
Paola
Gramatica. QSAR Research Unit in Environmental Chemistry
and Ecotoxicology, Department of Structural and Functional Biology, University
of Insubria, Varese, Italy. IN SILICO SCREENING OF ESTROGEN-LIKE CHEMICALS
BASED ON QSAR MODELS
10:00 - 10:20 Major
Talk
Nathalie
Marchand-Geneste. University of Bordeaux, Talence, France.
e-ENDOCRINE DISRUPTING CHEMICAL DATABASES FOR DERIVING QSAR MODELS
10:20 - 10:35 Oral
Communication
Natalja
Fjodorova. Laboratory of Chemometrics, National Institute
of Chemistry, Ljubljana, Slovenia. QSAR MODELLING OF CARCINOGENICITY
FOR REGULATOTY USE IN EUROPE
10:35 - 10:50 Oral
Communication
Vyacheslav
Nikolaev. Arbuzov Institute of Organic and Physical Chemistry,
Russian Academy of Sciences, Russia. QUASICRYSTALLINITY OF A LIQUID
STATE AS A BASIS FOR CREATING QSPR-MODELS AND DESCRIBING SYNERGIC EFFECTS
IN BINARY SYSTEMS
10:50 - 11:20 Coffee
Break
Computer-Aided Drug Discovery
(I) Dedicated to the Memory of Martyn Ford
Chairs:
Athina Geronikaki and Vladimir Poroikov
11:20 - 12:00 Plenary
Lecture
David
Livingstone. ChemQuest, Sandown, Centre for Molecular Design,
University of Portsmouth, UK. QSAR STUDIES USING THE PARASHIFT SYSTEM
11:55 - 12:15 Major
Talk
Florent
Barbault. ITODYS, University Paris, France. CYCLIN DEPENDENT
KINASE (CDK2/CDK4) SELECTIVITY ELUCIDATED BY MOLECULAR DYNAMICS AND QUANTUM
CHEMISTRY STUDIES
12:15 - 12:30 Oral
Communication
Peter
Fedichev. Quantum Pharmaceuticals, Moscow, Russia. BIOLOGICAL
SPECTRA ANALYSIS: LINKING BIOLOGICAL ACTIVITY PROFILES TO MOLECULAR TOXICITY
12:30 - 12:45 Oral
Communication
Catia
Teixeira. ITODYS, University Paris, France. 2D/3D QSAR
AND MOLECULAR MODELLING STUDIES OF NEW CLASS OF HIV-1 GP41 INHIBITORS
12:45 - 14:00 Lunch
Computer-Aided Drug Discovery
(II)
Chairs:
Daniel Domine and Douglas Oliver
14:00 - 14:40 Plenary
Lecture
Oleg
Raevsky. Institute of Physiologically Active Compounds, Russian
Academy of Sciences, Chernogolovka, Russia. HYDROGEN BONDING PARAMETRIZATION
IN QSAR AND DRUG DESIGN
14:40 - 15:00 Major
Talk
Hiroshi
Chuman. Institute of Health Biosciences, The University of
Tokushima, Japan. TOWARD BASIC UNDERSTANDING OF THE PARTITION COEFFICIENT
LOG P AND ITS APPLICATIONS IN QSAR
15:00 - 15:20 Major
Talk
Jianhua
Yao. Shanghai Institute of Organic Chemistry, Chinese Academy
of Sciences, China. NEW PREDICTION SYSTEM FOR MUTAGENICITY: CISOC-PSMT
AND ITS APPLICATIONS
15:20 - 15:35 Oral
Communication
Irene
Kouskoumvekaki. Center for Biological Sequence Analysis,
BioCentrum, Technical University of Denmark, Lyngby, Denmark. PREDICTION
OF PH-DEPENDENT AQUEOUS SOLUBILITY OF DRUG-LIKE MOLECULES AND DRUG CANDIDATES
WITH CHEMOINFORMATICS TOOLS
15:35 - 15:50 Oral
Communication
Ilkay
Yildiz. Ankara University, Faculty of Pharmacy, Department
of Pharmaceutical Chemistry, Tandogan-Ankara, Turkey. THREE-DIMENSIONAL
COMMON-FEATURE HYPOTHESES AND 2D-QSAR STUDIES ON SOME ANTIMICROBIOLOGICALLY
ACTIVE AMIDES AGAINST DRUG-RESISTANCE STAPHYLOCOCCUS AUREUS
15:50 - 16:20 Coffee
Break
Computer-Aided Drug Discovery
(III)
Chairs:
David Livingstone and Vladimir Palyulin
16:20 - 17:00 Plenary
lecture
Alexander
Tropsha. School of Pharmacy, University of North Carolina
at Chapel Hill, USA. COMBINATIONAL QSAR MODELING OF CHEMICAL TOXICANTS
TESTED AGAINST TETRAHYMENA PYRIFORMIS
17:00 - 17:20 Major
Talk
Douglas
Oliver. Unit for Drug Research and Development, School of
Pharmacy, North-West University Potchefstroom Campus, Potchefstroom, South
Africa. MOLECULAR MODELLING AND MEDICINAL CHEMISTY OF BIOACTIVE POLYCYCLIC
CAGE COMPOUNDS
17:20 - 17:40 Major
Talk
Esin
Aki. Pharmaceutical Chemistry Dept., Faculty of Pharmacy,
Ankara University, Ankara, Turkey. PHARMACOPHORE ANALYSIS OF TOPOISOMERASE
II INHIBITORY ACTIVE BENZAZOLES
17:40 - 17:55 Oral
Communication
Roman
Efremov. Institute of Bioorganic Chemistry, Russian Academy
of Sciences, Moscow, Russia. MOLECULAR MODELING OF MEMBRANE PROTEINS
– PERSPECTIVE DRUG TARGETS.
17:55 - 18:10 Oral
Communication
Kimito
Funatsu. The University of Tokyo, Department of Chemical
System Engineering, Japan. APPLICATION OF THE NOVEL MOLECULAR ALIGNMENT
METHOD USING THE HOPFIELD NEURAL NETWORK TO 3D-QSAR
18:10 - 18:25 Oral
Communication
Yuriy
Vorobjev. Institute of Chemical Biology and Fundamental Medicine
of Siberian Brunch of Russian Academy of Sciences, Novosibirsk, Russia.
AB INITIO DOCKING METHOD COMBINING CAVITY SEARCH WITH MOLECULAR DYNAMICS
18:25 - 18:45 Presentation
of CMTPI-2009
19:30 Gala
Dinner
05.09.2007
Computer-Aided Drug Discovery
(IV)
Chairs:
Hiroshi Chuman and Jean-Pierre Doucet
09:00 - 09:20 Major
Talk
Vladimir
Palyulin. Department of Chemistry, Moscow State University,
Moscow, Russia. MFTA-BASED DESIGN OF ACTIVE STRUCTURES
09:20 - 09:40 Major
Talk
Daniel
Domine. Merck Serono Geneva Research Center, Geneva, CH.
OPTIMIZING THE USE OF TOXICITY PREDICTION TOOLS ACROSS DRUG DISCOVERY STAGES
09:40 - 10:00 Major
Talk
Petko
Petkov. Laboratory of Mathematical Chemistry, Bourgas As.
Zlatarov University, Bourgas, Bulgaria. MECHANISM BASED COMMON REACTIVITY
PATTERN (COREPA) MODELING OF AHR BINDING AFFINITY
10:00 - 10:15 Oral
Communication
Tuomo
Kalliokoski. Department of Pharmaceutical Chemistry, University
of Kuopio, Finland. FIELDCHOPPER, MOLECULAR FIELD-BASED VIRTUAL SCREENING
METHOD. DESCRIPTION AND EVALUATION
10:15 - 10:30 Oral
Communication
Marjan
Vracko. National Institute of Chemistry, Ljubljana, Slovenia.
QSAR STUDY ON A SET OF QUINOXALINE COMPOUNDS AS ANTITUBERCULOSIS DRUGS
USING THE COUNTER PROPAGATION NEURAL NETWORKS
10:30 - 10:45 Oral
Communication
Banafsheh
Javahery. Department of Chemistry, Imam Hossein University,
Tehran, IRAN. STRUCTURAL-ACTIVITY RELATIONSHIP (SAR), ATOMIC ELECTRON
DENSITY AND CONFORMATIONAL INVESTIGATION OF FENTANYL ANALOGUES (FA)
10:45 - 11:15 Coffee
Break
SCI-MIX
Chairs:
Paola Gramatica and Ismail Yalcin
11:15 - 11:35 Major
Talk
Takashi
Okada. School of Science and Technology, Kwansei Gakuin University,
Japan. PHARMACOPHORE IDENTIFICATION BY DATA MINING
11:35 - 11:55 Major
Talk
Konstantin
Balakin. Chemical Diversity Research Institute, Khimki, Moscow
Region, Russia. NEW INSIGHTS FOR HERG INHIBITION USING MAPPING TECHNIQUES
11:55 - 12:10 Oral
Communication
Marcia
Ferreira. Instituto de Quimica, Universidade Estadual de Campinas,
Brazil. CHEMOMETRIC INVESTIGATIONS OF MULTIDRUG RESISTANCE IN STRAINS
OF THE PHYTOPATHOGENIC FUNGUS PENICILLIUM DIGITATUM
12:10 - 12:25 Oral
Communication
Melek
Turker Sacan. Bogazici University, Inst?tute of Environmental
Sciences, Istanbul, Turkey. ASSESSMENT AND MODELLING OF THE TOXICITY
OF SUBSTITUTED AROMATIC COMPOUNDS TO FIVE AQUATIC SPECIES
12:25 - 12:40 Oral
Communication
Sonja
Nikolic. The Rugjer Boskovic Institute, Zagreb, Croatia.
THE
ZAGREB APPROACH TO THE STRUCTURE-PROPERTY-ACTIVITY MODELING
12:40 - 14:00 Lunch
14:00 - 14:45 Plenary
Lecture
Nikolay
Zefirov. Department of Chemistry, Moscow State University,
Moscow, Russia. MEDICAL CHEMISTRY AND MATHEMATICS.
14:45 - 16:00 Closing
of the Symposium