Pereira M. S. C., Kiralj R., Ferreira M. M. C., "Theoretical study
of radical and neutral intermediates of artemisinin decomposition",
J.
Chem. Inf. Mod., 48, 85-98, (2008).
[Article]
Abstract.
Four artemisinin reductive decomposition routes A, B1, B2, and B3 with
13 species (QHS, 1/2, 3, 4, 5, 5a,
6,
7,
18, 18a, 19, 20, and 21) were studied
at the B3LYP/6-31G** level. Structures of the species were analyzed in
terms of geometrical parameters, Löwdin bond orders, partial atomic
charges and spin densities, electronic and free energies, and entropy.
Searches in the Cambridge Structural Database for high-level quality artemisinin-related
structures were also performed. Principal Component and Hierarchical Cluster
analyses were performed on selected electronic and structural variables
to rationalize relationships between the routes. The A and B1 routes are
possibly interconnected. Structural and electronic features of all species
show that there are two clusters: A-B1 and B2-B3. The latter cluster is
thermodynamically more favorable (DDG is -64
to -88 kcal mol-1) than the former (DDG
is -58 to -59 kcal mol-1), but kinetical
preference may be the opposite. Along the artemisinin decomposition routes,
especially B2 and B3, larger structural changes including formation of
branched structures and CO2 release are
related to increased exothermicity of the conversions, weakened attractive
oxygen-oxygen interactions, and increased entropy of the formed species.
The intermediate 4 definitely belongs to some minor artemisinin
decomposition route.
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